STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_09870ANK_REP_REGION domain-containing protein. (263 aa)    
Predicted Functional Partners:
RvY_09867-5
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
 
  
 0.922
RvY_07472-1
Uncharacterized protein.
    
0.835
RvY_14346-1
Uncharacterized protein.
    
 0.782
RvY_09866
ANK_REP_REGION domain-containing protein.
 
 
0.766
RvY_10198
Uncharacterized protein.
    
 0.748
RvY_09866-1
ANK_REP_REGION domain-containing protein.
 
 
0.739
RvY_02554
ACB domain-containing protein.
    
 0.726
RvY_02554-2
ACB domain-containing protein.
    
 0.726
RvY_05655-1
Uncharacterized protein.
    
 0.721
RvY_12841-1
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.712
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.