STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_10923Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (316 aa)    
Predicted Functional Partners:
RvY_07468-1
Uncharacterized protein.
   
 0.989
RvY_14355-1
Uncharacterized protein.
    
 0.986
RvY_12889-1
Uncharacterized protein.
   
 0.981
RvY_17786-1
Uncharacterized protein.
    
 0.980
RvY_09065-1
Uncharacterized protein.
   
 0.977
RvY_13496-1
SKIP_SNW domain-containing protein.
   
 0.974
RvY_15634-1
Uncharacterized protein.
   
 0.972
RvY_09016-1
Uncharacterized protein.
   
 0.970
RvY_04852-1
Uncharacterized protein.
    
 0.959
RvY_13864-1
Uncharacterized protein.
    
  0.942
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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