STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_10250-1Trehalase. (593 aa)    
Predicted Functional Partners:
RvY_13060-1
TPS-TPP.
  
 0.833
RvY_14214-1
Aamy domain-containing protein.
  
 
 0.743
RvY_15992-1
Treh acid.
  
 0.695
RvY_15994-1
Treh acid.
  
 0.695
RvY_04713-1
Phosphotransferase.
   
 
 0.680
RvY_15490-1
Alpha-amylase.
  
 
 0.560
RvY_15491-1
Alpha-amylase.
  
 
 0.560
RvY_10191-1
Uncharacterized protein.
   
 
  0.532
RvY_03223-1
Uncharacterized protein.
   
 
 0.521
RvY_06690-1
Uncharacterized protein.
   
 
 0.521
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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