STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_11523-2Uncharacterized protein. (955 aa)    
Predicted Functional Partners:
RvY_06200-1
Uncharacterized protein; Belongs to the semaphorin family.
  
 
 0.751
RvY_18612-1
Uncharacterized protein.
   
 0.707
RvY_09830
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.700
RvY_09830-1
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.700
RvY_02194-1
Uncharacterized protein.
    
 0.665
RvY_05286-1
Sema domain-containing protein.
    
 0.665
RvY_09678-1
Sema domain-containing protein.
    
 0.665
RvY_18648-1
Uncharacterized protein.
    
 0.665
RvY_00496-1
Uncharacterized protein.
  
 
 
 0.573
RvY_06548-1
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.570
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.