STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_13246-1Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (500 aa)    
Predicted Functional Partners:
RvY_16632-1
Uncharacterized protein.
   
 0.782
RvY_10035-1
Uncharacterized protein.
   
 0.753
RvY_10059
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.748
RvY_09499-1
Uncharacterized protein.
   
 0.748
RvY_16032-1
Uncharacterized protein.
   
 0.739
cox3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
 0.732
cox2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.730
RvY_01363-1
Uncharacterized protein.
    
 0.703
RvY_10699-3
Uncharacterized protein.
    
 0.673
RvY_03379-1
Uncharacterized protein.
   
 0.645
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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