STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_14260-1Uncharacterized protein. (274 aa)    
Predicted Functional Partners:
RvY_09273
Alkyl transferase; Belongs to the UPP synthase family.
   
 0.976
RvY_09273-1
Alkyl transferase; Belongs to the UPP synthase family.
   
 0.976
RvY_13606-1
Nudix hydrolase domain-containing protein.
  
 
 0.864
RvY_08299-1
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.860
RvY_10210-1
Uncharacterized protein.
     
 0.848
RvY_09151-1
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.834
RvY_13737-1
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.834
RvY_14486-1
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.834
RvY_08801-1
acidPPc domain-containing protein.
  
 
 0.824
RvY_14682-1
Uncharacterized protein.
     
 0.818
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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