STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_13800-1BTB domain-containing protein. (418 aa)    
Predicted Functional Partners:
RvY_14749-1
PHTB1_N domain-containing protein.
    
 0.705
RvY_18372-1
BBS1 domain-containing protein.
    
 0.693
RvY_09702-1
Uncharacterized protein.
    
 0.684
RvY_07472-1
Uncharacterized protein.
    
 0.666
RvY_02825-1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.662
RvY_08588-1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.662
RvY_14294-1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.662
RvY_17825
RING-type domain-containing protein.
    
 0.658
RvY_07843-1
UBX domain-containing protein.
    
  0.647
RvY_15678-2
BTB domain-containing protein.
  
  
 0.645
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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