STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_12309-2Protein kinase domain-containing protein. (848 aa)    
Predicted Functional Partners:
RvY_10075-1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.893
RvY_09057-1
Uncharacterized protein.
   
 0.890
RvY_09734-1
Uncharacterized protein.
   
 0.886
RvY_01115-1
Uncharacterized protein.
    
 0.884
RvY_15521-1
Uncharacterized protein.
    
 0.882
RvY_17043-1
ATG11 domain-containing protein.
    
 0.882
RvY_11710-1
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.861
RvY_13793-1
Uncharacterized protein.
    
 0.838
RvY_08136-1
Uncharacterized protein.
    
 0.830
RvY_06974-1
NRBF2_MIT domain-containing protein.
    
 0.813
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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