STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_14681-1Uncharacterized protein. (426 aa)    
Predicted Functional Partners:
RvY_09542-1
Uncharacterized protein.
    
 0.940
RvY_01767-1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
   0.930
RvY_10020-1
Rhodanese domain-containing protein.
    
   0.930
RvY_15740-1
Uncharacterized protein.
    
   0.930
RvY_10245-1
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
    
   0.913
RvY_14942
Uncharacterized protein.
    
 0.911
RvY_13196-1
Uncharacterized protein.
    
 
 0.911
RvY_14942-2
Uncharacterized protein.
    
 0.911
RvY_10608-1
Uncharacterized protein.
   
   0.861
RvY_02724-1
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
    
   0.856
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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