STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_13149-1Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
RvY_14647-1
GIDA_assoc domain-containing protein.
  
 0.924
RvY_12698
TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 0.896
RvY_12698-2
TrmE-type G domain-containing protein.
  
 0.896
RvY_12698-3
Uncharacterized protein.
  
 0.896
RvY_14190
Flavokinase domain-containing protein.
  
 
  0.891
RvY_03784-1
Uncharacterized protein.
  
 0.855
RvY_07902-1
Uncharacterized protein.
  
 0.855
RvY_11519-1
Uncharacterized protein.
  
 0.855
RvY_05317-1
Aminotran_5 domain-containing protein.
  
 
 0.795
RvY_16965-1
Tyrosine--tRNA ligase.
  
  
 0.794
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.