STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_14945Uncharacterized protein. (579 aa)    
Predicted Functional Partners:
RvY_03196-1
Diacylglycerol kinase.
     
 0.616
RvY_01541-1
Diacylglycerol kinase.
     
 0.604
RvY_10394-1
Diacylglycerol kinase.
     
 0.596
RvY_02691-1
acidPPc domain-containing protein.
     
 0.544
RvY_12434-1
acidPPc domain-containing protein.
     
 0.544
RvY_09443-1
PfkB domain-containing protein.
     
 0.543
RvY_09442-1
PfkB domain-containing protein.
     
 0.543
RvY_13963
Diacylglycerol kinase.
     
 0.520
RvY_13963-1
Diacylglycerol kinase.
     
 0.520
RvY_13963-3
Diacylglycerol kinase.
     
 0.520
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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