STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_12435-1Uncharacterized protein. (467 aa)    
Predicted Functional Partners:
RvY_14508-1
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 0.996
RvY_06058-1
PALP domain-containing protein.
 
 0.995
RvY_13703-1
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.995
RvY_00616-1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.980
RvY_07896-1
Uncharacterized protein.
  
 
 0.966
RvY_03996-1
AdoHcyase_NAD domain-containing protein.
  
 0.947
RvY_08656-1
Adenosylhomocysteinase.
  
 0.947
RvY_08551-1
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 0.934
RvY_11119-1
Uncharacterized protein.
  
 
 0.931
RvY_17462-1
Uncharacterized protein.
  
 0.925
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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