STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_13878-1Uncharacterized protein. (556 aa)    
Predicted Functional Partners:
RvY_17946-1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 0.922
RvY_09156-1
RMI1_N domain-containing protein.
    
 
 0.754
RvY_12566-1
Uncharacterized protein.
    
 
 0.724
RvY_11063-1
HABP4_PAI-RBP1 domain-containing protein.
    
 
 0.722
RvY_13575-1
Uncharacterized protein.
    
 
 0.639
RvY_09176-1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
    
 0.586
RvY_18637-1
RMI1_N domain-containing protein.
    
 
 0.583
RvY_17787-1
Uncharacterized protein.
    
 
 0.580
RvY_04926-1
Uncharacterized protein.
    
 
 0.528
RvY_03170-1
Uncharacterized protein.
    
 
 0.509
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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