STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_14277-1BTB domain-containing protein. (109 aa)    
Predicted Functional Partners:
RvY_07366-1
PCI domain-containing protein.
   
  0.613
RvY_07675-1
PCI domain-containing protein.
    
  0.610
RvY_14047-1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.601
RvY_14055-1
PCI domain-containing protein.
    
  0.580
RvY_12060-1
Uncharacterized protein.
    
  0.577
RvY_15232-1
MPN domain-containing protein.
    
  0.577
RvY_08019-1
Uncharacterized protein.
    
  0.567
RvY_01640-1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.538
RvY_02825-1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.538
RvY_08588-1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.538
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.