STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_15158-1Uncharacterized protein. (479 aa)    
Predicted Functional Partners:
RvY_08928-1
Uncharacterized protein.
   
 0.993
RvY_12789-1
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.992
RvY_09191-1
Uncharacterized protein.
    
 0.991
RvY_12758-1
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.991
RvY_01325-1
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.989
RvY_12757-1
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.986
RvY_12270-1
Uncharacterized protein.
   
 0.983
RvY_01270-1
Uncharacterized protein.
   
 
 0.975
RvY_08742-1
Uncharacterized protein.
    
 
 0.965
RvY_09902-1
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.845
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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