STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_15600-1MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (417 aa)    
Predicted Functional Partners:
RvY_09649-1
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
 0.999
RvY_16114-1
Adaptin_N domain-containing protein.
   
 0.999
RvY_15818-1
Clat_adaptor_s domain-containing protein.
   
 0.997
RvY_13033-1
AP-1 complex subunit gamma.
   
 0.993
RvY_11372-1
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
0.727
RvY_14619-1
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 
 0.585
RvY_08418-1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.584
RvY_13421-1
SAM domain-containing protein.
      
 0.554
RvY_13499-1
Uncharacterized protein.
      
 0.550
RvY_14350-1
RING-type domain-containing protein.
   
 
 0.536
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.