STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_15802-1Uncharacterized protein. (429 aa)    
Predicted Functional Partners:
RvY_07843-1
UBX domain-containing protein.
    
 
 0.997
RvY_07960-1
PUB domain-containing protein.
    
 0.994
RvY_17083-1
Uncharacterized protein.
    
 
 0.990
RvY_08886-1
Uncharacterized protein.
    
 0.989
RvY_00236
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.982
RvY_00236-2
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.982
RvY_05167-1
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.982
RvY_07800-1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 
 0.981
RvY_05059-1
U-box domain-containing protein.
    
 
 0.972
RvY_03960-1
Uncharacterized protein.
    
 
 0.963
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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