STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_13644-1Glycos_trans_3N domain-containing protein. (78 aa)    
Predicted Functional Partners:
RvY_16060-1
Uncharacterized protein.
  
 0.982
RvY_04456-1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
 0.974
RvY_01380-1
PNP_UDP_1 domain-containing protein.
  
 
 0.972
RvY_07075-1
Pribosyltran domain-containing protein.
    
 0.963
RvY_04159
Thymidine kinase.
    
 0.941
RvY_04159-2
Thymidine kinase.
    
 0.941
RvY_15790-1
CMP/dCMP-type deaminase domain-containing protein.
    
 0.938
RvY_04382-1
Uncharacterized protein.
    
 0.912
RvY_13408-1
Uncharacterized protein.
    
 0.912
RvY_12705-1
OMPdecase domain-containing protein.
    
 0.903
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.