STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_16171-1WAPL domain-containing protein. (1038 aa)    
Predicted Functional Partners:
RvY_17702-1
Uncharacterized protein.
   
 0.997
RvY_00201-1
Uncharacterized protein.
   
    0.992
RvY_15108-1
Structural maintenance of chromosomes protein.
   
 0.989
RvY_13482-1
SCD domain-containing protein.
   
 0.956
RvY_03785-1
Structural maintenance of chromosomes protein.
   
 0.947
RvY_07039-1
Nipped-B protein.
   
 0.939
RvY_14596-1
Uncharacterized protein.
    
 0.931
RvY_17819-1
Uncharacterized protein.
    
 0.931
RvY_11522-1
Uncharacterized protein.
     
 0.900
RvY_08257-1
Peptidase C50 domain-containing protein.
     
 0.872
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.