STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_16870Uncharacterized protein. (268 aa)    
Predicted Functional Partners:
RvY_06925-1
Uncharacterized protein.
     
 0.839
RvY_08226-1
CTP_transf_like domain-containing protein.
     
 0.812
RvY_10704-1
Uncharacterized protein.
     
 0.809
RvY_08692-1
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.778
RvY_01617-1
Uncharacterized protein.
     
 0.769
RvY_00601-1
Uncharacterized protein.
   
 
 0.752
RvY_17705-1
Uncharacterized protein.
   
 
 0.752
RvY_03236-1
Phos_pyr_kin domain-containing protein.
     
 0.749
RvY_13251-1
Phos_pyr_kin domain-containing protein.
     
 0.749
RvY_12677-1
Methyltranfer_dom domain-containing protein.
     
 0.744
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.