STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_17075-1Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (365 aa)    
Predicted Functional Partners:
RvY_00579-1
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.827
RvY_15454-1
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.827
RvY_15502-1
Uncharacterized protein.
   
 0.786
RvY_09491-1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.783
RvY_09152-1
Uncharacterized protein.
   
 0.778
RvY_05199-1
Uncharacterized protein.
 
 
    0.764
RvY_08928-1
Uncharacterized protein.
   
 0.755
RvY_15196-1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.755
RvY_05080-1
Uncharacterized protein.
   
 0.746
RvY_12758-1
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.746
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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