STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_17522Serine/threonine-protein phosphatase. (476 aa)    
Predicted Functional Partners:
RvY_15643-1
Uncharacterized protein.
   
 0.982
RvY_07472-1
Uncharacterized protein.
   
 0.954
RvY_13218-1
Uncharacterized protein.
   
 0.888
RvY_17367-1
Uncharacterized protein.
   
 0.888
RvY_02942-1
Uncharacterized protein.
    
 0.884
RvY_08727-1
Uncharacterized protein.
    
 0.884
RvY_04829-1
Uncharacterized protein.
    
 0.825
RvY_03812-1
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.818
RvY_14676-1
Uncharacterized protein.
    
 0.810
RvY_06098
EF-hand domain-containing protein.
    
 0.808
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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