STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_17532-1Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (526 aa)    
Predicted Functional Partners:
RvY_05751
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.798
RvY_05751-1
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.798
RvY_05750-1
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.793
RvY_09105-1
Uncharacterized protein.
    
 0.716
RvY_11751-1
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
     
 0.687
RvY_06479-1
Uncharacterized protein.
     
 0.662
RvY_06690-1
Uncharacterized protein.
     
 0.616
RvY_15208-1
Uncharacterized protein.
     
 0.616
RvY_17102
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.593
RvY_00456-1
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.585
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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