STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_17579-1Uncharacterized protein. (229 aa)    
Predicted Functional Partners:
RvY_04122-1
WD_REPEATS_REGION domain-containing protein.
   
 0.901
RvY_09057-1
Uncharacterized protein.
    
 0.892
RvY_10075-1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.841
RvY_07367-1
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.796
RvY_13597-1
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.793
RvY_18224-1
Autophagy-related protein 3.
    
 0.763
RvY_01115-1
Uncharacterized protein.
    
 0.751
RvY_03223-1
Uncharacterized protein.
   
 0.734
RvY_06690-1
Uncharacterized protein.
   
 0.723
RvY_15208-1
Uncharacterized protein.
   
 0.723
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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