STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_15377-1Uncharacterized protein. (292 aa)    
Predicted Functional Partners:
RvY_09405-1
Uncharacterized protein.
   
   0.947
RvY_08047-1
Ribosomal_S7 domain-containing protein.
    
   0.940
RvY_10842-1
Uncharacterized protein.
    
   0.940
RvY_07497-1
Uncharacterized protein.
   
   0.828
RvY_15406-1
MRP-S23 domain-containing protein.
   
   0.828
RvY_12751
Uncharacterized protein.
    
 
 0.826
RvY_12751-1
Uncharacterized protein.
    
 
 0.826
RvY_01352-1
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
    
 
 0.824
RvY_05551-1
Uncharacterized protein.
   
   0.824
RvY_11418-1
Uncharacterized protein.
   
   0.824
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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