STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_17664-1Uncharacterized protein. (292 aa)    
Predicted Functional Partners:
RvY_04967-1
Uncharacterized protein.
    
 
 0.886
RvY_07472-1
Uncharacterized protein.
   
 0.837
RvY_08211-1
Protein kinase domain-containing protein.
    
 0.752
RvY_06713-1
Tyrosine-protein kinase receptor.
    
 0.702
RvY_09753-1
Uncharacterized protein.
   
 0.697
RvY_10699-3
Uncharacterized protein.
    
 0.675
RvY_11767-1
TIR domain-containing protein.
   
 0.667
RvY_11793
Uncharacterized protein.
   
 0.657
RvY_11793-2
Uncharacterized protein.
   
 0.657
RvY_05085-1
Transket_pyr domain-containing protein.
   
 0.651
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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