STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_18683-1Uncharacterized protein. (467 aa)    
Predicted Functional Partners:
RvY_05527-1
Uncharacterized protein.
  
 
 0.796
RvY_10701-1
PAS domain-containing protein.
    
 0.782
RvY_17505-1
Uncharacterized protein.
    
 0.750
RvY_09016-1
Uncharacterized protein.
    
 
 0.749
RvY_12676-1
Uncharacterized protein.
    
 0.723
RvY_03178-1
HMG box domain-containing protein.
    
 0.719
RvY_05023-1
HOX7 antp/ftz.
    
 0.711
RvY_15622-1
Uncharacterized protein.
    
 
 0.689
RvY_17606-1
Uncharacterized protein.
    
 
 0.689
RvY_05529-1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.681
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
Server load: low (28%) [HD]