STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_17029-1Peptidoglycan-recognition protein; Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family. (182 aa)    
Predicted Functional Partners:
RvY_06445-1
Uncharacterized protein.
     
 0.770
RvY_12782-1
GH16 domain-containing protein.
     
 0.767
RvY_09654
PALP domain-containing protein.
   
 0.725
RvY_09654-2
PALP domain-containing protein.
   
 0.725
RvY_00904-1
Uncharacterized protein.
   
 0.668
RvY_13719-1
PALP domain-containing protein.
   
 0.668
RvY_02514-1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
 0.632
RvY_08135-1
Uncharacterized protein.
    
 0.599
RvY_11252
Uncharacterized protein.
    
 0.599
RvY_11252-1
Uncharacterized protein.
    
 0.599
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.