STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_18810zf-Tim10_DDP domain-containing protein. (113 aa)    
Predicted Functional Partners:
RvY_12564-1
zf-Tim10_DDP domain-containing protein.
   
 0.999
RvY_15370-1
zf-Tim10_DDP domain-containing protein.
  
 
0.995
RvY_07683-1
Uncharacterized protein.
   
 0.990
RvY_09081-1
Uncharacterized protein.
   
 0.990
RvY_10465-1
Uncharacterized protein.
   
 
 0.966
RvY_15690-1
DAGKc domain-containing protein.
    
 
 0.964
RvY_10164-1
CHCH domain-containing protein.
   
 0.947
RvY_18511-1
Uncharacterized protein.
   
 0.946
RvY_08633-1
Uncharacterized protein.
   
 
 0.924
RvY_15784-1
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
   
 0.902
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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