STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_19154-1Xpo1 domain-containing protein. (1181 aa)    
Predicted Functional Partners:
RvY_11859-1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.996
RvY_12889-1
Uncharacterized protein.
   
 0.978
RvY_01480-1
Uncharacterized protein.
    
 0.916
RvY_09893-1
Peptidase S59 domain-containing protein.
   
 0.780
RvY_00459-2
Uncharacterized protein.
   
 0.778
RvY_07344-1
Uncharacterized protein.
   
 
 0.744
RvY_10545-1
Importin N-terminal domain-containing protein.
   
 
 0.728
RvY_08091
Uncharacterized protein.
    
 0.719
RvY_08091-2
Uncharacterized protein.
    
 0.719
RvY_17688-1
Uncharacterized protein.
    
 0.714
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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