STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_17345-1DUF659 domain-containing protein. (198 aa)    
Predicted Functional Partners:
RvY_14599-1
Uncharacterized protein.
  
     0.513
RvY_14790-1
Uncharacterized protein.
  
     0.507
RvY_11854-1
BED-type domain-containing protein.
  
     0.491
RvY_18266-1
Uncharacterized protein.
  
     0.490
RvY_04143-1
Uncharacterized protein.
  
     0.480
RvY_01781-1
Uncharacterized protein.
  
     0.451
RvY_11539
Uncharacterized protein.
  
     0.437
RvY_16541-1
Uncharacterized protein.
  
     0.429
RvY_03748-1
Uncharacterized protein.
  
     0.425
RvY_03011-1
Dimer_Tnp_hAT domain-containing protein.
  
     0.411
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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