STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_18284-1J domain-containing protein. (776 aa)    
Predicted Functional Partners:
RvY_12534-1
Uncharacterized protein.
   
 0.999
RvY_04964-1
Plug_translocon domain-containing protein.
   
 
 0.998
RvY_05612-1
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.997
RvY_13234-1
Uncharacterized protein.
    
 
 0.997
RvY_17111-1
Protein kinase domain-containing protein.
    
 
 0.997
RvY_10061-1
HSP70-6; Belongs to the heat shock protein 70 family.
  
 
 0.979
RvY_11688-1
HSP70-7.
  
 
 0.979
RvY_03175-1
Uncharacterized protein.
     
 0.919
RvY_08831-1
Uncharacterized protein.
     
 0.898
RvY_09542-1
Uncharacterized protein.
     
 0.898
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.