STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_18985-1Glucosylceramidase. (545 aa)    
Predicted Functional Partners:
RvY_14158-1
Uncharacterized protein.
   
 0.987
RvY_00904-1
Uncharacterized protein.
     
 0.895
RvY_15537-1
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
   
 
 0.884
RvY_06066-1
Uncharacterized protein; Belongs to the acid ceramidase family.
   
 
 0.856
RvY_00067-1
Beta-galactosidase.
  
 0.834
RvY_10003-1
Beta-galactosidase.
  
 0.834
RvY_11680-1
Beta-galactosidase.
  
 0.834
RvY_08156-1
Uncharacterized protein.
  
 0.822
RvY_17477-1
DAGKc domain-containing protein.
    
 0.814
RvY_13655-1
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.804
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
Server load: low (18%) [HD]