STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472525_00497Unannotated protein. (361 aa)    
Predicted Functional Partners:
GCA_000472525_00496
Unannotated protein.
       0.773
GCA_000472525_00471
Unannotated protein.
  
   0.687
GCA_000472525_01920
Unannotated protein.
  
     0.679
GCA_000472525_00470
Unannotated protein.
  
     0.677
GCA_000472525_04537
Unannotated protein.
  
     0.645
GCA_000472525_01619
Unannotated protein.
  
   0.606
GCA_000472525_01401
Unannotated protein.
    
  0.601
GCA_000472525_04656
Unannotated protein.
  
   0.543
GCA_000472525_04046
Unannotated protein.
    
 0.542
GCA_000472525_00498
Unannotated protein.
       0.524
Your Current Organism:
Paraburkholderia dilworthii
NCBI taxonomy Id: 948106
Other names: Burkholderia dilworthii, Burkholderia dilworthii De Meyer et al. 2014, Burkholderia sp. WSM3556, Burkholderia sp. WSM4204, Burkholderia sp. WSM4206, HAMBI 3353, LMG 27173, LMG:27173, P. dilworthii, Paraburkholderia dilworthii (De Meyer et al. 2014) Sawana et al. 2015, strain WSM3556
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.