STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472525_00868Unannotated protein. (476 aa)    
Predicted Functional Partners:
GCA_000472525_03010
Unannotated protein.
 
  
 0.748
GCA_000472525_02554
Unannotated protein.
  
  
 0.664
GCA_000472525_05482
Unannotated protein.
 
  
 0.663
GCA_000472525_05331
Unannotated protein.
 
  
 0.641
GCA_000472525_00869
Unannotated protein.
 
     0.636
GCA_000472525_03048
Unannotated protein.
  
  
 0.609
GCA_000472525_00873
Unannotated protein.
 
     0.600
GCA_000472525_03741
Unannotated protein.
  
    0.598
GCA_000472525_01016
Unannotated protein.
 
  
 0.576
GCA_000472525_06474
Unannotated protein.
   
    0.568
Your Current Organism:
Paraburkholderia dilworthii
NCBI taxonomy Id: 948106
Other names: Burkholderia dilworthii, Burkholderia dilworthii De Meyer et al. 2014, Burkholderia sp. WSM3556, Burkholderia sp. WSM4204, Burkholderia sp. WSM4206, HAMBI 3353, LMG 27173, LMG:27173, P. dilworthii, Paraburkholderia dilworthii (De Meyer et al. 2014) Sawana et al. 2015, strain WSM3556
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.