STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472525_03943Unannotated protein. (254 aa)    
Predicted Functional Partners:
GCA_000472525_03940
Unannotated protein.
 
  
  0.959
GCA_000472525_03941
Unannotated protein.
 
  
  0.959
GCA_000472525_02007
Unannotated protein.
 
  
  0.942
GCA_000472525_03942
Unannotated protein.
 
     0.917
GCA_000472525_02008
Unannotated protein.
 
 
  0.910
GCA_000472525_02787
Unannotated protein.
  
    0.798
GCA_000472525_02788
Unannotated protein.
 
    0.783
GCA_000472525_06063
Unannotated protein.
  
  
  0.666
GCA_000472525_00855
Unannotated protein.
  
  
 0.600
GCA_000472525_04580
Unannotated protein.
 
     0.590
Your Current Organism:
Paraburkholderia dilworthii
NCBI taxonomy Id: 948106
Other names: Burkholderia dilworthii, Burkholderia dilworthii De Meyer et al. 2014, Burkholderia sp. WSM3556, Burkholderia sp. WSM4204, Burkholderia sp. WSM4206, HAMBI 3353, LMG 27173, LMG:27173, P. dilworthii, Paraburkholderia dilworthii (De Meyer et al. 2014) Sawana et al. 2015, strain WSM3556
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.