STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472525_04621Unannotated protein. (114 aa)    
Predicted Functional Partners:
GCA_000472525_04620
Unannotated protein.
 
   
 0.828
GCA_000472525_01405
Unannotated protein.
   
 
 0.688
GCA_000472525_00099
Unannotated protein.
   
   0.651
GCA_000472525_05511
Unannotated protein.
   
   0.651
GCA_000472525_06374
Unannotated protein.
   
   0.651
GCA_000472525_02341
Unannotated protein.
    
 0.648
GCA_000472525_00667
Unannotated protein.
   
   0.647
GCA_000472525_03174
Unannotated protein.
   
   0.647
GCA_000472525_04060
Unannotated protein.
   
   0.647
GCA_000472525_02422
Unannotated protein.
    
   0.635
Your Current Organism:
Paraburkholderia dilworthii
NCBI taxonomy Id: 948106
Other names: Burkholderia dilworthii, Burkholderia dilworthii De Meyer et al. 2014, Burkholderia sp. WSM3556, Burkholderia sp. WSM4204, Burkholderia sp. WSM4206, HAMBI 3353, LMG 27173, LMG:27173, P. dilworthii, Paraburkholderia dilworthii (De Meyer et al. 2014) Sawana et al. 2015, strain WSM3556
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.