STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N309_14886Proto-oncogene c-Rel. (587 aa)    
Predicted Functional Partners:
N309_05009
NF-kappa-B inhibitor alpha.
 
 
 0.988
N309_12915
Nuclear factor NF-kappa-B p105 subunit.
   
0.976
N309_02966
CREB-binding protein.
    
 0.958
N309_12706
Importin subunit alpha-3.
    
  0.956
N309_03731
Inhibitor of nuclear factor kappa-B kinase subunit beta.
    
 0.946
N309_14637
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
 0.946
N309_07468
Importin subunit alpha-4.
    
  0.914
N309_15420
NAD-dependent protein deacetylase sirtuin-1.
    
 0.911
N309_05767
N-lysine methyltransferase SETD6.
    
 0.910
N309_11284
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.896
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.