Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
N309_0957360S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (43 aa)    
Predicted Functional Partners:
N309_08424
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 0.999
N309_14870
60S ribosomal protein L32.
   
 0.999
N309_00863
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
N309_06711
60S ribosomal protein L14.
   
 0.999
N309_01367
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 0.999
N309_01871
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.999
N309_05770
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.999
N309_11284
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.999
N309_10566
60S ribosomal protein L31.
   
 0.999
N309_07994
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.999
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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