STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPY19L4Protein dpy-19 homolog 4. (722 aa)    
Predicted Functional Partners:
VWA7
Von Willebrand factor A domain-containing protein 7.
    
 
 0.517
NOC4L
Nucleolar complex associated 4 homolog.
      
 0.515
TMTC3
Transmembrane and TPR repeat-containing protein 3.
   
  
 0.501
HABP4
Hyaluronan binding protein 4.
      
 0.493
SLC45A1
Solute carrier family 45 member 1.
      
 0.475
GK5
Putative glycerol kinase 5; Belongs to the FGGY kinase family.
   
  
 0.470
TMEM9B
TMEM9 domain family member B.
      
 0.468
ZNF703
Zinc finger protein 703.
      
 0.463
CASC1
Cancer susceptibility 1.
   
    0.463
CHMP6
Charged multivesicular body protein 6.
      
 0.453
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.