STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOP1Otopetrin 1. (612 aa)    
Predicted Functional Partners:
DRD2
D(2) dopamine receptor isoform long; Belongs to the G-protein coupled receptor 1 family.
 
    
 0.645
F6XLN2_CALJA
Uncharacterized protein.
      
 0.644
ADH4
Alcohol dehydrogenase 4 (class II), pi polypeptide.
   
  
 0.632
ADH7
Alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide.
   
  
 0.620
PLCB2
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
      
 0.574
CALHM1
Calcium homeostasis modulator 1.
   
  
 0.572
TAS1R2
Taste 1 receptor member 2.
      
 0.560
SLC30A4
Solute carrier family 30 member 4.
   
  
 0.547
OTOL1
Otolin 1.
      
 0.541
DRD3
Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family.
 
    
 0.520
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.