STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WIPI1WD repeat domain phosphoinositide-interacting protein 1. (444 aa)    
Predicted Functional Partners:
ATG16L2
Autophagy related 16 like 2.
   
 0.991
ATG16L1
Autophagy related 16 like 1.
   
 0.990
ATG2A
Autophagy related 2A.
    
 0.988
ATG2B
Autophagy-related protein 2 homolog B.
    
 0.986
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.959
ATG12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.943
ULK2
Unc-51 like autophagy activating kinase 2.
    
 
 0.893
ULK1
Unc-51 like autophagy activating kinase 1.
    
 
 0.889
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
     
 0.877
BECN1
Beclin-1.
    
 0.846
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.