STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4CCharged multivesicular body protein 4C. (233 aa)    
Predicted Functional Partners:
PDCD6IP
Programmed cell death 6-interacting protein isoform 2.
   
 0.990
CHMP7
Charged multivesicular body protein 7.
    
0.987
CHMP2A
Charged multivesicular body protein 2A.
   
 0.977
CHMP3
Uncharacterized protein.
   
 0.964
VPS4B
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
    
 0.961
CHMP4B
Charged multivesicular body protein 4B.
  
 
 
0.957
CHMP6
Charged multivesicular body protein 6.
    
0.954
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.934
VPS25
Vacuolar protein-sorting-associated protein 25.
    
 0.933
CHMP4A
Charged multivesicular body protein 4A.
  
 
 
0.926
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.