STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGXB4HMG-box containing 4. (621 aa)    
Predicted Functional Partners:
CCDC30
Coiled-coil domain containing 30.
      
 0.907
BRD7
Bromodomain containing 7.
   
  
 0.789
FGFRL1
Fibroblast growth factor receptor like 1.
   
  
 0.781
FMC1-LUC7L2
Putative RNA-binding protein Luc7-like 2 isoform 1.
      
 0.779
RERE
Arginine-glutamic acid dipeptide repeats protein isoform a.
      
 0.772
WDR64
WD repeat domain 64.
      
 0.734
CCAR1
Cell division cycle and apoptosis regulator protein 1.
      
 0.720
NAGPA
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
      
 0.620
BPTF
Bromodomain PHD finger transcription factor.
    
 0.602
TOM1
Target of myb1 membrane trafficking protein; Belongs to the TOM1 family.
 
    
 0.600
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.