STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLX5Distal-less homeobox 5. (289 aa)    
Predicted Functional Partners:
RUNX2
RUNX family transcription factor 2.
   
 
 0.833
DLX6
Distal-less homeobox 6.
  
 
0.826
LHX6
LIM homeobox 6.
   
  
 0.727
BMP2
Bone morphogenetic protein 2.
     
 0.641
MYF6
Myogenic factor 6.
   
  
 0.612
PVALB
Parvalbumin alpha; Belongs to the parvalbumin family.
      
 0.607
MSX2
Homeobox protein MSX-2.
   
0.602
BMP4
Bone morphogenetic protein 4 preproprotein.
     
 0.600
MECP2
Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC).
      
 0.585
FOXG1
Forkhead box G1.
   
 
 0.584
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.