STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD9Tetraspanin. (228 aa)    
Predicted Functional Partners:
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.961
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.953
CD81
Tetraspanin.
   
 
 0.942
IGSF8
Immunoglobulin superfamily member 8.
    
 
 0.934
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.922
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
   
 0.879
CD63
Tetraspanin.
   
 
0.869
CD44
CD44 molecule (Indian blood group).
   
 
 0.857
IZUMO3
IZUMO family member 3.
     
 0.844
ADAM10
Disintegrin and metalloproteinase domain-containing protein 10.
    
 0.826
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.