STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIGFPhosphatidylinositol-glycan biosynthesis class F protein isoform 1. (219 aa)    
Predicted Functional Partners:
PIGO
Phosphatidylinositol glycan anchor biosynthesis class O.
    
 0.986
PIGK
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.965
PIGB
Mannosyltransferase.
     
 0.962
PIGG
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 0.960
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
     
 0.953
PIGS
Phosphatidylinositol glycan anchor biosynthesis class S.
     
 0.930
GPAA1
Glycosylphosphatidylinositol anchor attachment 1.
     
 0.924
PIGU
Phosphatidylinositol glycan anchor biosynthesis class U protein.
     
 0.914
PIGN
Phosphatidylinositol glycan anchor biosynthesis class N.
    
 0.789
PIGH
Uncharacterized protein.
   
  
 0.647
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.