RHPN2 protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RHPN2

Rhophilin Rho GTPase binding protein 2. (686 aa)

Predicted Functional Partners:

EFNB1

0.708

SOX4

0.652

TSG101

0.648

CHMP4C

0.618

TM9SF1

0.618

CHMP4B

0.618

VPS4B

0.560

VPS4A

0.560

MYNN

0.550

RHOA

0.542

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHMP4B	CHMP4C	ENSCJAP00000034124	ENSCJAP00000000710	Charged multivesicular body protein 4B.	Charged multivesicular body protein 4C.	0.957
CHMP4B	RHPN2	ENSCJAP00000034124	ENSCJAP00000001241	Charged multivesicular body protein 4B.	Rhophilin Rho GTPase binding protein 2.	0.618
CHMP4B	TSG101	ENSCJAP00000034124	ENSCJAP00000056503	Charged multivesicular body protein 4B.	Uncharacterized protein.	0.842
CHMP4B	VPS4A	ENSCJAP00000034124	ENSCJAP00000076945	Charged multivesicular body protein 4B.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.914
CHMP4B	VPS4B	ENSCJAP00000034124	ENSCJAP00000057274	Charged multivesicular body protein 4B.	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	0.914
CHMP4C	CHMP4B	ENSCJAP00000000710	ENSCJAP00000034124	Charged multivesicular body protein 4C.	Charged multivesicular body protein 4B.	0.957
CHMP4C	RHPN2	ENSCJAP00000000710	ENSCJAP00000001241	Charged multivesicular body protein 4C.	Rhophilin Rho GTPase binding protein 2.	0.618
CHMP4C	TSG101	ENSCJAP00000000710	ENSCJAP00000056503	Charged multivesicular body protein 4C.	Uncharacterized protein.	0.845
CHMP4C	VPS4A	ENSCJAP00000000710	ENSCJAP00000076945	Charged multivesicular body protein 4C.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.934
CHMP4C	VPS4B	ENSCJAP00000000710	ENSCJAP00000057274	Charged multivesicular body protein 4C.	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	0.961
EFNB1	RHPN2	ENSCJAP00000071378	ENSCJAP00000001241	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Rhophilin Rho GTPase binding protein 2.	0.708
MYNN	RHPN2	ENSCJAP00000066384	ENSCJAP00000001241	Myoneurin isoform A.	Rhophilin Rho GTPase binding protein 2.	0.550
RHOA	RHPN2	ENSCJAP00000025155	ENSCJAP00000001241	Transforming protein RhoA.	Rhophilin Rho GTPase binding protein 2.	0.542
RHPN2	CHMP4B	ENSCJAP00000001241	ENSCJAP00000034124	Rhophilin Rho GTPase binding protein 2.	Charged multivesicular body protein 4B.	0.618
RHPN2	CHMP4C	ENSCJAP00000001241	ENSCJAP00000000710	Rhophilin Rho GTPase binding protein 2.	Charged multivesicular body protein 4C.	0.618
RHPN2	EFNB1	ENSCJAP00000001241	ENSCJAP00000071378	Rhophilin Rho GTPase binding protein 2.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.708
RHPN2	MYNN	ENSCJAP00000001241	ENSCJAP00000066384	Rhophilin Rho GTPase binding protein 2.	Myoneurin isoform A.	0.550
RHPN2	RHOA	ENSCJAP00000001241	ENSCJAP00000025155	Rhophilin Rho GTPase binding protein 2.	Transforming protein RhoA.	0.542
RHPN2	SOX4	ENSCJAP00000001241	ENSCJAP00000067352	Rhophilin Rho GTPase binding protein 2.	Transcription factor SOX.	0.652
RHPN2	TM9SF1	ENSCJAP00000001241	ENSCJAP00000012832	Rhophilin Rho GTPase binding protein 2.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.618