Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAPBPLTAP binding protein like. (468 aa)    
Predicted Functional Partners:
TAP1
Transporter 1, ATP binding cassette subfamily B member.
   
 
 0.954
TAP2
Uncharacterized protein.
   
 
 0.953
TAPBP
TAP binding protein.
   
 
0.921
CALR
Calreticulin.
     
 0.919
Caja-B3
Ig-like domain-containing protein; Belongs to the MHC class I family.
  
  
  0.916
PDIA3
Protein disulfide-isomerase.
   
 
 0.915
H9KXB3_CALJA
Ig-like domain-containing protein; Belongs to the MHC class I family.
   
 
  0.901
HLA-F
Major histocompatibility complex, class I, F; Belongs to the MHC class I family.
   
 
  0.901
ENSCJAP00000076910
Ig-like domain-containing protein; Belongs to the MHC class I family.
   
 
  0.901
HLA-E
Major histocompatibility complex, class I, E; Belongs to the MHC class I family.
     
  0.900
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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