STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR19WD repeat domain 19. (1342 aa)    
Predicted Functional Partners:
IFT140
Intraflagellar transport 140.
    
0.997
IFT122
Intraflagellar transport 122.
   
 0.997
WDR35
WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking.
  
 0.996
IFT43
Intraflagellar transport 43.
    
 0.985
TTC21B
Tetratricopeptide repeat domain 21B.
   
 0.983
IFT80
WD_REPEATS_REGION domain-containing protein.
   
 0.937
ENSCJAP00000069907
Uncharacterized protein.
   
 0.918
IFT52
Intraflagellar transport 52.
  
  
 0.917
WDR18
WD repeat domain 18.
    
 0.907
WDR18-2
Uncharacterized protein.
    
 0.907
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.